Journal of Applied Ecology
○ Wiley
Preprints posted in the last 30 days, ranked by how well they match Journal of Applied Ecology's content profile, based on 35 papers previously published here. The average preprint has a 0.03% match score for this journal, so anything above that is already an above-average fit.
Craveiro, J.; Bugalho, M.; Vaz, P. G.
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By concentrating rodents along verges, roads can reshape rodent-mediated seed dispersal, yet empirical tests remain scarce. We conducted a two-year field experiment in Mediterranean oak woodlands in southern Portugal to test how seed dispersal varies with distance from roads across road type (paved vs. unpaved) and road-forest context (edge vs. non-edge). We tracked labeled holm oak acorns, recording dispersal distances and the number of dispersal events. The two metrics responded differently to road distance. Dispersal distances changed little with distance from roads in non-edge contexts but increased in edge road-forest contexts (2x longer at 400 m than at 10 m) and showed a year x distance-to-road interaction, with longer dispersal distances farther from roads in the second year (a poor mast year). Dispersal distances were also longer when acorns were deposited under shrubs and in areas of higher tree density, and decreased with greater natural acorn availability. In contrast, the number of dispersal events declined with distance from roads (30% more events at 10 m than at 400 m) and was higher along unpaved than paved roads (39% more events). Dispersal frequency also increased in the poor mast year and with shrub cover. No acorns crossed the road. Thus, road verges can concentrate rodent seed handling but do not increase dispersal distances near roads nor provide cross-road seed connectivity; instead, dispersal outcomes depend on edge context, road type, and microhabitat structure. Management that retains structural cover at verges and the adjacent forest edge (e.g., shrub patches and non-uniform clearing) can harness verge-associated activity to increase acorn deposition in sheltered microsites and promote regeneration farther into forest interiors in roaded landscapes.
Kochanski, J. M.; McFarlane, S. L.; Damschen, E. I.; Gratton, C.
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IntroductionHuman land-use intensification and the resulting habitat loss are primary drivers of insect pollinator declines. Habitat restoration offers a promising approach to counteract these declines, yet landscape-level evaluations of bee responses to restoration and management remain limited. We conducted a two-year, landscape-scale study in Wisconsin, USA, to assess how different intensities of tallgrass prairie restoration and management affect bumble bees (Bombus spp.). ObjectivesThis study aimed to determine whether (1) bumble bee abundance and diversity increase with assisted restoration, and (2) outcomes differ between low-(seeded only) and moderate-intensity (seeded and managed with prescribed fire) interventions. MethodsUsing catch-and-release surveys, we measured bumble bee abundance and diversity at 32 sites representing a gradient in restoration intervention: no intervention (unassisted recovery), low intervention, and moderate intervention. ResultsBumble bee abundance and diversity were higher at assisted restoration sites (low and moderate intervention) than at unassisted sites. Although both tended to be greater at moderate than low intervention intensities, these differences were not statistically significant. Bumble bee community composition also differed across intervention intensity, driven by shifts in dominant species (e.g., B. impatiens and B. griseocollis). Rarer taxa, including endangered and vulnerable species, occurred only at assisted restoration sites, with the largest populations at moderate intervention sites. Across all sites, bumble bee responses were strongly and positively associated with floral abundance, but not with semi-natural habitat in the surrounding landscape. ConclusionOur findings demonstrate that assisted grassland restoration can effectively increase bumble bee abundance and diversity, supporting its value as a conservation practice for pollinators. Implications for Practice: (1) Grassland restorations targeting plant communities can successfully support nontarget pollinators across a range of management intensities and landscape contexts. Adding seeds of pollinator-preferred plants could improve restorations with low floral abundance and diversity. (2) Management of existing restorations is important to maintain abundant floral resources and diverse pollinator communities. Because sites varied widely in prescribed fire use, our findings likely represent a conservative estimate of its benefits, and higher intervention intensity (e.g., repeated seeding, regular fire, mechanical or chemical shrub and invasive plants control) may further enhance outcomes for bumble bees.
Painkow Neto, E.; Silvius, K. M.; Barquero, G.; Neves, D. C.; Fragoso, J. M. V.
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Animal population control is widely used to mitigate conflicts between wildlife and agriculture worldwide. Structured, monitored removals are rare in South America, however, and their consequences for wildlife populations as well as their effectiveness in reducing crop damage are little understood. Using eight years of data from an experimental white-lipped peccary management program in an agricultural mosaic in the Brazilian Cerrado biome, we assess how structured, non-lethal removals affect both peccary demography and second-crop corn damage. Leslie removal models based on 6,619 captured individuals indicated that cumulative removals to approximately 85% of the initial population strongly reduced peccary abundance, with limited demographic compensation despite fluctuations in reproductive output. Corn crop damage, quantified with satellite imagery, declined over time and was correlated with peccary population size. Interannual variation in population growth and juvenile recruitment was poorly explained by climate, fire, or landscape composition. Source-sink dynamics likely play a role in maintaining healthy populations at the regional scale. Together, these results demonstrate that sustained and monitored ungulate removals can reliably reduce population size and agricultural damage, supporting coexistence between wildlife and food crop production in human-dominated tropical landscapes.
Gusman Montalvan, P.; Velez-Mora, D. P.; Ramon, P.; Gusman Montalvan, E.; Dominguez, D.; Donoso, D. A.
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O_LITropical dry forests are among the most threatened ecosystems globally, yet the consequences of livestock overgrazing for ant communities remain poorly documented, particularly in the Tumbesian biodiversity hotspot of southwestern Ecuador, where uncontrolled goat grazing constitutes the dominant disturbance agent. C_LIO_LIWe sampled ant communities (Formicidae) across a goat-grazing disturbance gradient in Zapotillo (Loja Province, Ecuador), establishing three disturbance levels (Dense, Semi-dense, and Open Forest) with nine 60 x 60 m plots per level (n = 27) and 486 pitfall traps. Community responses were assessed using abundance-based and presence-absence analyses of morphospecies richness, Hill-number diversity, community composition, beta diversity decomposition, and functional guild structure; vegetation structure was characterized using satellite-derived NDVI. C_LIO_LIWe recorded 47,459 individuals belonging to 22 morphospecies in six subfamilies. Morphospecies richness declined with disturbance (Dense: 19, Semi-dense: 15, Open: 12), with four specialist genera exclusive to Dense Forest. Beta diversity decomposition revealed a shift from turnover-dominated dissimilarity at moderate disturbance to nestedness-dominated dissimilarity at high disturbance, indicating progressive habitat filtering as the dominant community-restructuring process. C_LIO_LICommunity composition differed among disturbance levels (PERMANOVA: F = 4.49, R{superscript 2} = 0.272, p = 0.001) and was correlated with NDVI (r{superscript 2} = 0.341, p = 0.013). Cryptic/soil and Leaf-cutter guilds were nearly eliminated from Open forest while the Opportunist guild expanded markedly, indicating that functional homogenization precedes detectable taxonomic impoverishment. C_LIO_LIOvergrazing drives directional ant diversity loss and biotic homogenization at both taxonomic and functional levels in the Tumbesian dry forest, underscoring the conservation value of intact Dense forest. C_LI
Berard, A.; Plat, N.; Pradel, J.; Galan, M.; Loiseau, A.; Piry, S.; Blanchet, J.; Cesari, L.; Berthier, K.; Rivoal, J.-B.; Pellett, C.; Valbuena, R.; Jactel, H.; Charbonnel, N.
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O_LIThe global decline of natural forests is accompanied by a rapid expansion of commercial tree plantations, which are expected to further increase to meet growing demand for wood products. However, planted forests generally support lower biodiversity than natural forests, particularly when monospecific and intensively managed. In this context, broadleaved hedgerows have been proposed as a nature-based solution to enhance biodiversity within conifer-dominated plantation landscapes. Such features may be especially beneficial for small mammals, including rodents and shrews, which are key contributors to forest ecosystem functioning. However, their effects on small mammal communities remain largely unquantified. C_LIO_LIHere, we assessed variation in small mammal communities among habitat types within a native pine plantation-dominated landscape in southwestern France. Using a multi-year, multi-season survey, we compared species richness and abundance among plantation edges, broadleaved hedgerows embedded within plantations and natural broadleaved forests. We further tested whether environmental descriptors of hedgerow sites influenced dominant species and whether seasonal and interannual demographic dynamics modified habitat-related patterns. C_LIO_LIPine plantation edges and broadleaved hedgerows supported lower small mammal species richness than natural broadleaved forests and were dominated by two habitat generalists, Apodemus sylvaticus and Crocidura russula. This pattern was driven by the near absence of the forest specialist Clethrionomys glareolus. Hedgerows did not increase species richness relative to plantations, but provided favourable habitat for A. sylvaticus, which was scarce in pine plantation, while supporting fewer C. russula. Variation in hedgerow structure and composition further influenced A. sylvaticus abundance, while seasonal and interannual rodent population dynamics modulated habitat-related differences. C_LIO_LIOur results indicate that intensively managed pine plantations act as environmental filters, excluding forest-associated small mammals. While broadleaved hedgerows benefited one species, their capacity to restore forest-specialist communities was limited without broader landscape-scale interventions. These findings highlight both the ecological benefits and constraints of edge-based habitat interventions and provide guidance for designing and evaluating biodiversity-oriented management in plantation landscapes. C_LI
Dimitriou, A.; Gaynor, K. M.; Benson-Amram, S.; Percy, M.; Burton, C.
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Humans are profoundly reshaping the natural world. These changes are giving rise to complex and mutually risky dynamics between people and large carnivores. In protected areas across North America, bears (Ursus sp.) face rapidly rising recreation pressures that can alter their use of the landscape, either displacing them from high-quality habitats or drawing them into human-wildlife conflicts through habituation or attraction to anthropogenic resources. However, disentangling responses to recreation from other drivers can be difficult because human activity covaries with environmental and seasonal processes that also shape bear activity. We leveraged the partial closure of the popular Berg Lake Trail in Mount Robson Park, British Columbia, Canada, to investigate whether black (Ursus americanus) and grizzly bears (Ursus arctos) showed fear, attraction or neutral behavioural responses to varying recreation levels across multiple spatiotemporal scales. To understand both anticipatory responses to predictable patterns of human activity, and reactive responses to hiker events, we used detections from 43 camera traps over two years (July 2023-June 2025). We compared weekly habitat use, daily activity patterns, and direct responses to hikers (using Avoidance-Attraction Ratios; AARs) among camera sites and between open and closed sections of the trail. Our results revealed that both bear species exhibited patterns consistent with fear responses, while some black bear behaviours were also consistent with attraction responses. Both kinds of responses reflect anticipatory strategies rather than reactionary behaviours (i.e., no AAR effect). Neither species avoided recreation spatially at the weekly scale: black bears were detected more at site-weeks with greater recreation intensity, while grizzly bears were consistently detected more at sites closer to hiking trails. However, both species used daily temporal partitioning to avoid direct encounters with humans. These findings demonstrate scope for human-bear coexistence when recreation levels are managed to be moderate and predictable, and bears have sufficient space to segregate from humans during peak times. Thus, successful coexistence will hinge on co-adaptation by both bears and people. Understanding how recreation influences bear behaviour, and the spatiotemporal scale at which that occurs, is critical for guiding effective adaptive management aimed at fostering human-bear coexistence in high-traffic protected areas.
Faticov, M.; Dahlberg, A.; Hjalten, J.; Lofroth, T.; Hekkala, A.-M.
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Deadwood is a key habitat for forest biodiversity, yet how tree species and deadwood type shape linked fungal-beetle communities remain poorly understood. We explored saproxylic fungi and beetles in a large-scale restoration experiment on birch, pine, and spruce deadwood created as burned standing trees, felled logs, girdled trees, high stumps, and uprooted trees. As expected, we found that tree species was the main driver of both fungal and beetle community composition, while deadwood type was the second most important driver. Fungal-beetle community correlations were context dependent: significant multivariate correlations were detected for pine and spruce, but not birch, and were strongest in burned standing pine, burned standing spruce, and girdled spruce. Across all tree species and deadwood types, fungal-beetle co-occurrence networks were consistently less nested and more modular than expected by chance, indicating structured, compartmentalized associations of fungi and beetles even within single deadwood units. SynthesisThese results show that maintaining diverse tree species and deadwood types is essential to retain specialized multitrophic communities and the ecological processes they support.
Morgan, M. C.; Hopkins, C. R.; Forster, R.; Gomez, A.
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Global biodiversity is declining at an unprecedented rate due to rapid environmental change and increasing human pressures. Ongoing urban expansion fragments natural systems, while urban design increasingly seeks to mitigate these impacts through the integration of blue-green infrastructure. Effective biodiversity monitoring is therefore essential to evaluate ecological conditions within these novel socio-ecological systems. Although urban biodiversity monitoring is challenged by its high landscape heterogeneity, dense human populations provide opportunities for large-scale data collection through public participation in citizen science. Using data from 25 City Nature Challenge (CNC) projects across the United Kingdom (2020-2025), we assessed the effects of the four-day bioblitz on species inventories, participation in biological recording, and spatial patterns of recording effort. CNC events doubled public participation in iNaturalist recording relative to baseline activity, leading to the documentation of numerous previously unrecorded species through increased observer effort and broader use of urban blue-green spaces. These results show that CNC events enhance urban biodiversity datasets by increasing the number of observers and reducing spatial and observer biases, providing a cost-effective tool for enriching urban biodiversity data. In addition to generating ecological data, CNC events could have public health benefits through increased exposure to urban blue-green spaces.
Kovacsics-Vari, G.; Sonkoly, J.; Szel-Toth, K.; McIntosh-Buday, A.; Guallichico Suntaxi, L. R.; Madar, S.; Diaz Cando, P. E.; Törö-Szijgyarto, V.; Tothmeresz, B.; Török, P.
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The effects of the selection of livestock type (e.g., sheep or cattle) and grazing intensity on the soil seed bank of sand grasslands of conservation interest were studied. 25 grazed grassland sites classified into four grazing intensity categories were studied. The soil seed bank was analysed by seedling emergence; germinated seedlings were classified into morpho-functional, social behaviour type (SBT) and CSR strategy groups. The following hypotheses were tested: i) Diversity and density of soil seed banks are lower in sheep-grazed sites than in cattle-grazed ones. ii) The species composition, diversity, and density of the soil seed banks are more strongly affected by grazing intensity than by the livestock type. iii) Leaf traits, SBT and CSR strategy composition are highly affected both by livestock type and grazing intensity. The main effect of livestock type only affected seed bank density, while that of grazing intensity had a significant effect on most of the variables. Most of the studied variables were affected by the interaction of grazing intensity and livestock type. Total seed bank density was lower at all grazing intensity levels in sheep-grazed sites than in cattle-grazed ones, especially close to frequently visited places. We found that sheep grazing sustained a much lower total seed bank density and lower density of species of natural and semi-natural habitats regardless to the grazing intensity. Thus, livestock type must be carefully selected and high-intensity sheep grazing should be avoided in the long-run when managing sand grasslands. HighlightsO_LIThe soil seed banks of sheep and cattle grazed sand grassland were studied C_LIO_LIEffect of grazing intensity found the most important driver of seed bank diversity and density C_LIO_LIThe total soil seed bank density was higher in cattle than sheep grazed sites C_LIO_LIBoth intensity and livestock type must be considered in the grassland management planning C_LIO_LIHigh intensity sheep grazing should be avoided in sand grassland management C_LI
Gillies, G. J.; Dungey, M. P.; Eckert, C. G.
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O_LIChanges in habitat structure across species distributions may contribute to the generation and maintenance of range limits, but few studies have evaluated this by directly measuring habitat availability across relevant spatial scales. C_LIO_LIHere, we test the predictions that coarse-scale and patch-level habitat availability decline towards and beyond the northern range limit of Pacific coastal dune endemic Camissoniopsis cheiranthifolia. We used aerial imagery and geographic information system (GIS) tools to measure the coarse-scale availability of coastal dune habitat in California and Oregon. The availability of finer-scale habitat patches specifically suitable for C. cheiranthifolia was measured in a 2-generation field survey of > 4,200 5m x 5m plots randomly distributed across 1100 km of coastal dune habitat transcending the species northern range limit. At each plot, we estimated the proportion of area that contained suitable habitat as well as recorded occupancy by C. cheiranthifolia. As an alternative approach to visually estimating habitat suitability, we recorded plant community composition at each plot to predict beyond-range habitat suitability using a random forest model. C_LIO_LIContrary to our predictions, we found that coastal dune habitat, measured coarsely from aerial imagery, was more abundant and continuous towards and beyond the northern range limit. At the fine scale, however, the proportion of plots with suitable habitat (patch suitability) and the proportion of habitat within plots that was suitable (patch size) declined across the range limit. Moreover, patches were more isolated from one another and, in one survey year, less temporally stable towards and beyond the range limit. Finally, occupancy by C. cheiranthifolia was less likely in smaller, more isolated, and temporally unstable patches, providing mechanistic insight to the previously observed decline in occupancy towards the range limit. C_LIO_LISynthesis: Taken together, our results suggest that fine-scale habitat patch configuration changes in ways that likely impede patch colonization, thereby reducing occupancy and limiting the species northern distribution. Thus, consideration of geographic variation in patch and landscape structure, rather than only coarse-scale habitat availability, may be essential for understanding the processes that limit species ranges. C_LI
Dimitriou, A.; Benson-Amram, S.; Gaynor, K.; Burton, C.
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The rising demand for outdoor recreation worldwide may be undermining the conservation objectives of protected areas (PAs). We leveraged a natural experiment, in which two adjacent PAs were closed to the public for different durations during the COVID-19 pandemic. Using detections from 39 camera traps in Joffre Lakes and Garibaldi Parks, Canada, from 2020-2022, we examined how recreation influenced mammal habitat use and diversity. Bayesian regression showed weak evidence that, when recreation was higher, detections declined for black bear, mule deer, and marten, while detections of bobcat and hoary marmot shifted closer to trails. Accumulation curves revealed that species richness and diversity were higher in the closed vs. open PA in 2020 (mean differences of -5.04 for richness and -0.33 for Shannon diversity). However, diversity did not decline consistently despite increases in recreation in 2021 and 2022. Notably, several rare species were only detected in the lower-recreation PA, suggesting they may be filtered out of the higher-recreation PA. This emphasizes the need for long-term monitoring to detect delayed and cumulative effects of recreation on mammal communities. Given growing global pressures on biodiversity, we urge PA managers to prioritize adaptive management to assess and balance outdoor recreation with conservation goals.
Hopf, J. K.; Giraldo-Ospina, A.; Caselle, J.; Kroeker, K.; Carr, M.; Hastings, A.; White, J. W.
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Marine protected areas (MPAs) are increasingly promoted as climate mitigation tools, yet guidance on their placement to maximize resilience against climate stressors like marine heatwaves remains limited. Here, we develop MPA placement guidelines that explicitly consider a mechanistic pathway through which MPAs could enhance kelp forest resilience to heatwaves: protecting fishery-targeted urchin predators to prevent kelp overgrazing. Using a spatially explicit, tri-trophic model of California kelp forests, we evaluate alternative MPA configurations across a hypothetical coastline where half the habitat experiences an increased probability of experiencing heatwaves. We found that effective MPA placement depends on whether MPAs are being newly established or reconfigured within an existing network, and that among-patch connectivity and spillover played vital roles in the relative effectiveness of different MPA configurations. Changes in resilience occurred primarily at the patch scale, with trade-offs between increased within-MPA resilience and decreased resilience in some fished areas, resulting in minimal coastwide population effects. For example, for new MPAs, large single MPAs within heatwave-prone areas maximized within-MPA resilience gains, while multiple small MPAs in heatwave refugia best supported whole-coast resilience. When reconfiguring established networks, expanding existing MPAs in refugia areas was most effective. We also demonstrate the importance of considering MPA recovery timescales: for example, relocating old MPAs to heatwave refugia yielded minimal short-term benefits due to the loss of rebuilt, previously fished, predator biomass. Our findings demonstrate that climate-adaptive marine planning should explicitly consider the spatiotemporal implications of trophic cascades, connectivity, and transient population dynamics to support ecosystem resilience.
Baiotto, T.; Cosma, C.; Cheung, Y. Y. J.; Narango, D.; Woodard, J.; McCarville, P.; Echeverri, A.; Horne, G.; Wood, E.; Williams, N. M.; Seltmann, K. C.; Fleri, J. R.; Owens, A.; Lequerica Tamara, M.; Boren, A.; Doneski, S.; Guralnick, R. P.; Li, D.; Guzman, L. M.
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Global pollinator declines threaten the health of ecosystems and food systems, underscoring the urgency of conservation actions such as habitat restoration. However, data gaps on plant use among pollinators continue to limit reliable design of restoration plant mixes. To address this, we present NECTAR (Network-Enhanced Conservation Tool for Analysis and Recommendation), a new modular framework that integrates multiple data modalities-including species distributions, phenometrics, and phylogenetic data-to infer flower visitation and host plant interactions from spatial, temporal, and phylogenetic overlap, generating spatially explicit plant-insect interaction networks that guide planting recommendations for pollinator habitat restoration. We demonstrate the utility of NECTAR by generating a large plant-insect metaweb across California, comprising 1,247,081 spatially explicit interactions for 5,131 pollinator species and 5,178 native plant species. Predicted networks recovered significantly more interactions than null models, demonstrating that integrating multiple ecological constraints improves interaction prediction. In realistic restoration simulations, NECTARs data-driven plant mix recommendations support up to 2.8 times more pollinator species compared to existing resources and random selection of plants. This optimization facilitates the inclusion of multiple goals and constraints, and provides complementary decision-making information to existing resources. NECTAR offers a scalable, evidence-based framework for translating increasingly available global biodiversity data into locally actionable restoration guidance, with broad potential to improve pollinator habitat restoration worldwide.
Swift, M. E.; Songhurst, A.; McCullogh, G.; Beytell, P.; Naidoo, R.
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Reliable freshwater access drives terrestrial wildlife movements and habitat use globally. The small, rain-fed seasonal pools critical for dryland wildlife persistence are vulnerable to rising temperatures and unstable precipitation regimes projected under climate change. In southern Africa, which is expected to warm rapidly by 2100, the drying and disappearance of surface water may cause a breakdown in seasonal migrations of large, area-sensitive, and water-dependent wildlife species. Furthermore, the disappearance of ephemeral water may concentrate wildlife around remaining surface water, increasing resource competition and human-wildlife conflict. An accurate understanding of the dynamics and drivers of seasonal surface water will therefore be critical to wildlife and human health as climate change intensifies. Here, we present a framework and empirical analysis of fine-scale surface water mapping in the 520,000km2 Kavango Zambezi Transfrontier Conservation Area (KAZA), the worlds largest terrestrial conservation area. From 2019-2025, we implemented Otsu thresholding on median Automated Water Extraction Index imagery from 10m Sentinel-2 MSI, leveraging high wet season contrast between vegetation and water as a dry season positive mask. We created >35 quasi-monthly KAZA-wide Ephemeral Surface Water (ESW) rasters (mean classification accuracy 87%, compared to 50% accuracy for existing water products), and found wet season precipitation drivers of non-riparian water fill levels did not extend into the dry season. Then, using GPS data from 27 African savanna elephants (Loxodonta africana), which typically visit water every 48 hours, we compared elephant water visitation rates based on ESW to existing 30m Global Surface Water (GSW) maps. Models using ESW estimated 99% of elephant data came within a 48-hour window, compared to 42% for GSW, suggesting that ESW is a better proxy for actual wildlife water use in animal movement modeling. As aridification threatens to diminish surface water resources, we must model the drivers of wildlife movements at the scale of wildlife needs. With ESW, we provide fine scale accessible surface water data and a straightforward coding architecture for applications beyond KAZA.
Ardichvili, A. N.; Bittlingmaier, M.; Freschet, G. T.; Loreau, M.; Arnoldi, J.-F.
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O_LISpecies diversity potentially has a dual effect on communities: a generally positive effect on overall community biomass, reflecting the expression of species response and interaction traits, and a poorly characterised effect on mass-specific species contribution to ecosystem functions, reflecting the expression of their effect traits. Disentangling the effects of biodiversity on total biomass from those on effect trait expression would help settle a long-standing debate by clarifying how biodiversity relates to both facets of species effects on ecosystem functioning. C_LIO_LIFollowing the classical BEF approach, we calculate expected ecosystem function based on observed functioning in monoculture. We then derive a net biodiversity effect (NBE) and decompose it into four components: the classical complementarity and selection effects on total community biomass, and complementarity and selection effects on effect trait expression. The latter two reflect, respectively, a complementarity or facilitation in how effect traits influence the function, and how species with the highest potential for increasing the function become dominant in the community. C_LIO_LIWe illustrate this NBE decomposition with three ecosystem functions (nitrogen retention capacity, soil hydraulic conductivity improvement, and forage digestibility) measured in assembled communities under controlled experimental conditions of perennial grassland plants. Regarding nitrogen retention, we find a positive complementary effect via total biomass, but a negative biodiversity effect via effect trait expression. For hydraulic conductivity improvement, biodiversity effects are mostly mediated by total biomass. As for forage digestibility, we found a positive complementarity effect on trait expression, outweighed however by a negative selection effect. This analysis reveals how biodiversity may have contrasting effects on ecosystem functions via its impact on biomass and effect trait expression. C_LI SynthesisSeparating between the effect of biodiversity on plant community biomass and on effect trait expression at the community level is one important step towards understanding the pathways by which diverse plant communities drive ecosystem functioning.
Howard, M. M.; Bolin, L. G.; Bogar, G. D.; Evans, S. E.; Lennon, J. T.; Marquart-Pyatt, S. T.; Lau, J. A.
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Microbial communities can shift under drought in ways that enhance plant performance during drought ("microbe-mediated acclimation"). However, it is also possible for microbial communities to shift in ways that worsen the effects of drought ("mal-acclimation"). It is unclear how and where microbe-mediated acclimation vs. mal-acclimation occurs, or if there are types of soils or microbial communities that are more likely to harbor microbes that enhance plant acclimation and limit mal-acclimation. We tested for microbe-mediated plant acclimation/mal-acclimation to drought in soils from 21 maize farms in the midwestern United States, spanning a range of climate, soil types, and management practices. We first conditioned soil microbial communities to drought vs. well-watered conditions in a greenhouse and then tested for microbe-mediated acclimation by growing maize in soils inoculated with the conditioned microbial communities under drought and well-watered conditions. Drought-conditioned soils did not enhance plant performance under drought. In fact, one third of the farms exhibited mal-acclimation, especially under well-watered conditions where wet-conditioned soils reduced plant performance in well-watered contemporary conditions. Farm management practices, climate, soil texture, and microbial diversity generally did not predict when this microbe-mediated mal-acclimation occurred. Overall, these results suggest that in agricultural soils, microbes may frequently impede-rather than facilitate-plant acclimation to soil moisture levels. Open research statementThe plant and soil data used in this study are available via the Environmental Data Initiative repository at https://doi.org/10.6073/pasta/f4a0db3a076cf6d8cef908947f82736e. The bacterial and fungal amplicon sequence data are available via the European Nucleotide Archive under accessions PRJEB110071 and PRJEB109827, respectively.
Petruzelova, J.; Petruzela, J.; Cerna, A.; Kotasova Adamkova, M.
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Artificial pond construction is widely used in wetland restoration, yet biodiversity outcomes depend strongly on design and subsequent management. We tested how different regimes (grazing, mowing, and no management) influence habitat structure, water conditions, and aquatic macroinvertebrate diversity in newly excavated experimental ponds within an eutrophic wetland in South Moravia (Czechia). Across four focal groups (Mollusca, Odonata, Coleoptera, Heteroptera), we observed rapid colonisation of the newly built ponds. Species richness and densities rose during early development, dropped after drying events, and then partially recovered, indicating repeated "resetting" of communities under fluctuating hydrology. Periodic drying also prevented fish stock establishment. Management significantly affected species composition and both grazed and mowed ponds displayed higher densities (abundances) than controls, but differed only slightly in terms of species richness. The grazed ponds were characterised by high sunlight exposure, reduced reed dominance, and trampling-generated high littoral heterogeneity. These ponds showed highest numbers of taxa adapted to shallow and warm waterbodies, muddy substrate, semiaquatic microhabitats, or newly emerged and disturbed habitats. The mowed ponds promoted dense submergent vegetation, supporting Odonata representation and other taxa requiring aquatic vegetation. The control ponds remained highly shaded by high-grown reed, organic-matter rich, hosting a set of taxa tolerant of low-light, low-oxygen conditions. At the wetland scale, multiple small ponds increased overall diversity through high between-pond heterogeneity. Our results highlight that pond construction alone is insufficient for wetland restoration: follow-up long-term management regimes, especially extensive grazing, can rapidly generate structural heterogeneity and sustain diverse aquatic invertebrate assemblages in eutrophic wetlands.
Diethelm, A. C.; Schultz, C. B.; McKnight, S. R.; Deen, E. A.; Lehner, A. M.; Pelton, E. M.; Crone, E. E.
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Migration is widely recognized as a strategy for animals to track seasonally shifting resources. Yet, seasonal and spatial dynamics of migration are challenging to study, particularly for difficult-to-track insects. Among insects, monarch butterflies (Danaus plexippus) have a well-documented fall migration, but spring breeding recolonization remains poorly understood, particularly for the western population. We conducted multi-year surveys across six regions in the western United States to characterize monarch breeding phenology and evaluate three related hypotheses: (i) the successive broods model, with discrete generations shifting activity across the breeding range, (ii) a diffusion-like expansion model with overlapping breeding periods, and (iii) a mid-summer lull model with temporary summer declines in breeding for areas near the overwintering habitat. Monarch immature presence served as an indicator of local breeding activity. Our results do not support the successive broods or mid-summer lull hypotheses. Breeding onset occurred earlier near overwintering areas and gradually expanded north-and eastward, with sustained activity in many regions throughout the season. Termination of breeding also occurred earlier at more distant sites, resulting in longer breeding activity nearer to overwintering habitat. Immature monarch density declined with distance from overwintering areas at onset and termination, suggesting delayed colonization of peripheral regions. Together, these results support a diffusion-like expansion of breeding rather than sequential generational replacement. Western monarchs also do not initiate or terminate breeding in close synchrony with host plant availability, contrary to predictions from resource-tracking theory. These findings highlight fundamental differences between western monarch breeding dynamics and paradigms for eastern monarchs, demonstrating that a single species can employ fundamentally different spatial strategies for recolonizing its breeding range in different regions. More generally, these results distinguish insect migration from systems with direct movements between wintering and breeding habitats, and underscore the value of long-term, landscape-scale monitoring for resolving habitat use across heterogeneous environments.
Goodall, T.; Busi, S. B.; Griffiths, R. I.; Read, D. S.; Thorpe, A.; Jones, B.; Redhead, J.; Hulmes, L.; Hulmes, S.; Ridding, L.; Peyton, J.; Pereira, G.; Gweon, H. S.; Pywell, R.
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The restoration of species-rich calcareous grasslands is a critical conservation objective, yet the recovery of the invisible below-ground microbiome remains poorly quantified compared to above-ground vegetation. Using a unique 143-year land-use chronosequence on Salisbury Plain, UK, we investigated the trajectory of ecosystem reassembly across arable, regenerating (23 and 67 years), and ancient grasslands. By integrating vegetation surveys with soil physiochemistry, microbial profiling, and shotgun metagenomics, we identified a profound functional decoupling between floral and edaphic recovery. While vegetation diversity recovered relatively rapidly, approaching saturation within 23-67 years, soil properties exhibited persistent legacy effects and slow convergence. Bacterial richness decreased with restoration age, reflecting a transition from disturbance-adapted copiotrophs in arable soils to a specialised, oligotrophic community in ancient sites. This taxonomic contraction was conversely matched by an expansion in functional potential, driven by the emergence of specific taxa (e.g., Microthrixaceae, Aquihabitans sp.) and metabolic pathways associated with complex carbon cycling and stress tolerance. Crucially, the soil ecosystem did not reach equilibrium even after 67 years, characterised by persistent legacy phosphorus and a slow accumulation of soil organic matter. These findings suggest that passive regeneration alone may be insufficient for full soil functional recovery, and that strategies targeting microbial assembly and long-term carbon dynamics warrant further evaluation.
O'Sullivan, J.; Whittaker, C.; Xenakis, G.; Robson, T.; Perks, M.
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Peatlands are an important terrestrial carbon sink which, when drained, can produce substantial CO2 efflux. Low productivity forestry planted on drained peatlands can become a net carbon source if losses from drained soils exceed sequestration by the trees. Decision support tools which assist resource allocation and intervention planning in forest-to-bog restoration are needed to mediate this substantial environmental harm. Predicting carbon mitigation benefits associated with forest-to-bog restoration is a major challenge, however, due to the lack of long-term monitoring programs and the fact that mitigation times depend on processes distant from the intervention. Here we introduce the PEATREST life cycle assessment (LCA) which predicts carbon fluxes associated with forest-to-bog restoration, including due to processes far from restored sites. The LCA estimates mitigation timescales defined as the time following intervention at which the restored peatland is predicted to sequester or store more carbon than the forestry would have if retained. HighlightsO_LIHere we develop a novel forest-to-bog Life cycle assessment (LCA) tool C_LIO_LIThe LCA predicts carbon mitigation times following peatland restoration C_LIO_LIThe model combines a variety of process-based and empirical sub-models C_LIO_LIExample implementations for two different restoration scenarios are explored C_LIO_LISensitivity analysis highlights the model inputs that most impact outcomes C_LI Graphical abstract(A single, concise figure that serves as a visual summary of the main research findings described in your manuscript.) O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=80 SRC="FIGDIR/small/715261v1_ufig1.gif" ALT="Figure 1"> View larger version (18K): org.highwire.dtl.DTLVardef@f243f5org.highwire.dtl.DTLVardef@14bc4c7org.highwire.dtl.DTLVardef@164261borg.highwire.dtl.DTLVardef@1db3b_HPS_FORMAT_FIGEXP M_FIG The PEATREST Life cycle assessment (LCA) generates compound time series of carbon sequestration and carbon storage for two scenarios: the forest-to-bog peatland restoration (PR) and a counterfactual (CF) of forestry retention. By comparing the two scenarios, the LCA predicts the carbon mitigation timescales (vertical dashed lines). These are defined as the time following harvesting at which the peatland is predicted to sequester more (emit less), or to have stored more (lost less) carbon, than the forestry would have if retained. C_FIG